PhysioDesigner
A modeling tool for multilevel physiological systems

Specifications

  • PHML 1.0 (Physiological Hierarchy Markup Language)PHML is an XML specification to describe hierarchical structure of physiological systems and their dynamics.
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  • PHPL 1.0 (PH Parameter List)PHML is an XML specification to describe a list of values of only static type physical quantities and initial values of state type physical quantities in a model.
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  • PHSP 1.0 (PH Simulation Parameter)PHSP is an XML specification to describe correspondences of parameters (static type physical quantities and initial values of state type physical quantities) in a model and value sets which the parameters can take in simulations. By parsing a PHPS file and PHML model, Flint can run a bunch of simulations with changing parameter values.
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  • ISD 1.0ISD format is a binary format used by Flint to describe time series data.
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